I am setting up continuous integration using GitHub Actions. One of the prerequisites (samtools) is most easily installed by conda. The standard way to use installed packages is to activate the corresponding conda environment. I am looking for a way…
I have followed every version of the instructions on the AWS-EC2 setup for RAPIDS.ai: https://rapids.ai/cloud#AWS-EC2 I can confirm that I am using the exact instance type in the instructions, and following the steps exactly. When I try to use the…
When I use the following command to create a new virtual environment, it succeeds. conda create -n my_env python=3.7 But when I wanted to export the package of the new environment to the requirements.txt file, I found that many other…
I am trying to download the Kinetics-600 dataset for activity recognition and for that I am following the instructions in this repo: https://github.com/activitynet/ActivityNet However, at the step conda env create -f environment.yml I get this error: ruamel_yaml.constructor.ConstructorError: could not determine…
I'm trying to get the R package reticulate working on a CentOS 7.8 system using RStudio Server v1.2.5042 with a custom environment created with conda. When I initiate a Python job with reticulate, I get an error that some system…
I am trying to update a conda environment: conda update --all but get the following Fetching package metadata ............. InvalidSpecError: Invalid spec: =20190808 output of conda list is as follows: alabaster 0.7.10 py36h174008c_0 anaconda custom py36ha4fed55_0 anaconda-client 1.6.14 py36_0 anaconda-navigator…
I'm getting a Malformed version string error with my conda. I have no idea how to debug this or how to check it. Can anyone help? GitHub has talked about the issue but I haven't seen any fixes. -bash-4.1$ conda…
I have a wordpress website running with Apache. From that website, I need to run a python code, but the libraries I need are configured inside an Anaconda environment. To activate the anaconda environment, I need to run: source activate…