Fail install mongodb on Centos 7 with Package error

samchu
November 2, 2020
213 views
0 votes
2 Answers

I try to install mongodb to Centos 7 server with PHP. I follow the install guide from https://www.php.net/manual/en/mongodb.installation.pecl.php

But sudo pecl install mongodb show error message:

WARNING: channel "pecl.php.net" has updated its protocols, use "pecl channel-update pecl.php.net" to update
downloading mongodb-1.8.1.tgz ...
Starting to download mongodb-1.8.1.tgz (1,292,453 bytes)
................................................................................................................................................................................................................................................................done: 1,292,453 bytes
586 source files, building
running: phpize
Can't find PHP headers in /usr/include/php
The php-devel package is required for use of this command.
ERROR: `phpize' failed

As the error message recommded, I install php-devel package by

yum install php-devel

But I got a lot of Dependency error:

Error: Package: libstdc++-devel-4.8.5-16.el7_4.2.x86_64 (ultra-centos-7.4-updates)
           Requires: libstdc++(x86-64) = 4.8.5-16.el7_4.2
           Installed: libstdc++-4.8.5-28.el7_5.1.x86_64 (installed)
               libstdc++(x86-64) = 4.8.5-28.el7_5.1
           Available: libstdc++-4.8.5-16.el7.x86_64 (ultra-centos-7.4-base)
               libstdc++(x86-64) = 4.8.5-16.el7
           Available: libstdc++-4.8.5-16.el7_4.1.x86_64 (ultra-centos-7.4-updates)
               libstdc++(x86-64) = 4.8.5-16.el7_4.1
           Available: libstdc++-4.8.5-16.el7_4.2.x86_64 (ultra-centos-7.4-updates)
               libstdc++(x86-64) = 4.8.5-16.el7_4.2
Error: Package: libcom_err-devel-1.42.9-10.el7.x86_64 (ultra-centos-7.4-base)
           Requires: libcom_err(x86-64) = 1.42.9-10.el7
           Installed: libcom_err-1.42.9-12.el7_5.x86_64 (installed)
               libcom_err(x86-64) = 1.42.9-12.el7_5
           Available: libcom_err-1.42.9-10.el7.x86_64 (ultra-centos-7.4-base)
               libcom_err(x86-64) = 1.42.9-10.el7
Error: Package: gcc-c++-4.8.5-16.el7_4.2.x86_64 (ultra-centos-7.4-updates)
           Requires: libstdc++ = 4.8.5-16.el7_4.2
           Installed: libstdc++-4.8.5-28.el7_5.1.x86_64 (installed)
               libstdc++ = 4.8.2-16.el7_5
               libstdc++ = 4.8.5-28.el7_5.1
           Available: libstdc++-4.8.5-16.el7.x86_64 (ultra-centos-7.4-base)
               libstdc++ = 4.8.5-16.el7
               libstdc++ = 4.8.2-16.el7
           Available: libstdc++-4.8.5-16.el7_4.1.x86_64 (ultra-centos-7.4-updates)
               libstdc++ = 4.8.5-16.el7_4.1
               libstdc++ = 4.8.2-16.el7_4
           Available: libstdc++-4.8.5-16.el7_4.2.x86_64 (ultra-centos-7.4-updates)
               libstdc++ = 4.8.5-16.el7_4.2
               libstdc++ = 4.8.2-16.el7_4
Error: Package: glibc-devel-2.17-196.el7_4.2.x86_64 (ultra-centos-7.4-updates)
           Requires: glibc = 2.17-196.el7_4.2
           Installed: glibc-2.17-222.el7.x86_64 (installed)
               glibc = 2.17-222.el7
           Available: glibc-2.17-196.el7.x86_64 (ultra-centos-7.4-base)
               glibc = 2.17-196.el7
           Available: glibc-2.17-196.el7_4.2.x86_64 (ultra-centos-7.4-updates)
               glibc = 2.17-196.el7_4.2
Error: Package: glibc-headers-2.17-196.el7_4.2.x86_64 (ultra-centos-7.4-updates)
           Requires: glibc = 2.17-196.el7_4.2
           Installed: glibc-2.17-222.el7.x86_64 (installed)
               glibc = 2.17-222.el7
           Available: glibc-2.17-196.el7.x86_64 (ultra-centos-7.4-base)
               glibc = 2.17-196.el7
           Available: glibc-2.17-196.el7_4.2.x86_64 (ultra-centos-7.4-updates)
               glibc = 2.17-196.el7_4.2
Error: Package: gcc-4.8.5-16.el7_4.2.x86_64 (ultra-centos-7.4-updates)
           Requires: libgomp = 4.8.5-16.el7_4.2
           Installed: libgomp-4.8.5-28.el7_5.1.x86_64 (installed)
               libgomp = 4.8.2-16.el7_5
               libgomp = 4.8.5-28.el7_5.1
           Available: libgomp-4.8.5-16.el7.x86_64 (ultra-centos-7.4-base)
               libgomp = 4.8.5-16.el7
               libgomp = 4.8.2-16.el7
           Available: libgomp-4.8.5-16.el7_4.1.x86_64 (ultra-centos-7.4-updates)
               libgomp = 4.8.5-16.el7_4.1
               libgomp = 4.8.2-16.el7_4
           Available: libgomp-4.8.5-16.el7_4.2.x86_64 (ultra-centos-7.4-updates)
               libgomp = 4.8.5-16.el7_4.2
               libgomp = 4.8.2-16.el7_4
Error: Package: 1:openssl-devel-1.0.2k-8.el7.x86_64 (ultra-centos-7.4-base)
           Requires: openssl-libs(x86-64) = 1:1.0.2k-8.el7
           Installed: 1:openssl-libs-1.0.2k-12.el7.x86_64 (installed)
               openssl-libs(x86-64) = 1:1.0.2k-12.el7
           Available: 1:openssl-libs-1.0.2k-8.el7.x86_64 (ultra-centos-7.4-base)
               openssl-libs(x86-64) = 1:1.0.2k-8.el7
Error: Package: libkadm5-1.15.1-8.el7.x86_64 (ultra-centos-7.4-base)
           Requires: krb5-libs(x86-64) = 1.15.1-8.el7
           Installed: krb5-libs-1.15.1-19.el7.x86_64 (installed)
               krb5-libs(x86-64) = 1.15.1-19.el7
           Available: krb5-libs-1.15.1-8.el7.x86_64 (ultra-centos-7.4-base)
               krb5-libs(x86-64) = 1.15.1-8.el7
Error: Package: krb5-devel-1.15.1-8.el7.x86_64 (ultra-centos-7.4-base)
           Requires: krb5-libs(x86-64) = 1.15.1-8.el7
           Installed: krb5-libs-1.15.1-19.el7.x86_64 (installed)
               krb5-libs(x86-64) = 1.15.1-19.el7
           Available: krb5-libs-1.15.1-8.el7.x86_64 (ultra-centos-7.4-base)
               krb5-libs(x86-64) = 1.15.1-8.el7
Error: Package: libsepol-devel-2.5-6.el7.x86_64 (ultra-centos-7.4-base)
           Requires: libsepol(x86-64) = 2.5-6.el7
           Installed: libsepol-2.5-8.1.el7.x86_64 (installed)
               libsepol(x86-64) = 2.5-8.1.el7
           Available: libsepol-2.5-6.el7.x86_64 (ultra-centos-7.4-base)
               libsepol(x86-64) = 2.5-6.el7
Error: Package: libselinux-devel-2.5-11.el7.x86_64 (ultra-centos-7.4-base)
           Requires: libselinux(x86-64) = 2.5-11.el7
           Installed: libselinux-2.5-12.el7.x86_64 (installed)
               libselinux(x86-64) = 2.5-12.el7
           Available: libselinux-2.5-11.el7.x86_64 (ultra-centos-7.4-base)
               libselinux(x86-64) = 2.5-11.el7
 You could try using --skip-broken to work around the problem
 You could try running: rpm -Va --nofiles --nodigest

Below are the server details, any solution?

yum repolist

Loaded plugins: changelog, fastestmirror, versionlock
Loading mirror speeds from cached hostfile
 * epel: download.nus.edu.sg
 * remi-php73: mirrors.thzhost.com
 * remi-safe: mirrors.thzhost.com
repo id                                                                    repo name                                                                                               status
MongoDB/7/x86_64                                                           MongoDB Repository                                                                                          62
*epel/x86_64                                                               Extra Packages for Enterprise Linux 7 - x86_64                                                          13,463
ius/x86_64                                                                 IUS for Enterprise Linux 7 - x86_64                                                                        486
mongodb-org-3.4/7                                                          MongoDB Repository                                                                                         125
nodesource/x86_64                                                          Node.js Packages for Enterprise Linux 7 - x86_64                                                           106
remi-php73                                                                 Remi's PHP 7.3 RPM repository for Enterprise Linux 7 - x86_64                                              384
remi-safe                                                                  Safe Remi's RPM repository for Enterprise Linux 7 - x86_64                                               4,006
ultra-centos-7.4-base                                                      UltraServe CentOS-7.4 - Base                                                                             7,407
ultra-centos-7.4-extras                                                    UltraServe CentOS-7.4 - Extras                                                                             401
ultra-centos-7.4-updates                                                   UltraServe CentOS-7.4 - Updates                                                                          1,836
ultra-centos-7.x-newrelic-monitoring                                       UltraServe CentOS-7.x - New Relic Infrastructure Monitoring Agent                                           10
ultra-centos-7.x-ultrarepo                                                 UltraServe CentOS-7.x - UltraServe Repo Packages                                                            50
repolist: 28,336

rpm -q centos-release

centos-release-7-5.1804.el7.centos.2.x86_64

php –version

PHP 7.3.23 (cli) (built: Sep 29 2020 08:33:03) ( NTS )
Copyright (c) 1997-2018 The PHP Group
Zend Engine v3.3.23, Copyright (c) 1998-2018 Zend Technologies

Answers

Chosen as BEST ANSWER
- samchu
- November 3, 2020 at 4:33 am
- 0 votes
0
Seem the ultra-centos-7.4-base come with AWS EC2 server.

To people who face the same dependency issue, you may consider change the repos source by:
```
wget -O /etc/yum.repos.d/CentOS-Base.repo http://wiki.docking.org/index.php/CentOS_7_Base.repo
sed -i  's/$releasever/7/g' /etc/yum.repos.d/CentOS-Base.repo
```
Double check you repo:
```
yum repolist 
```
Then you should able to run yum install php-devel

(Edit)

- RemiCollet
- November 2, 2020 at 10:20 am
- 0 votes
0
remi-php73 Remi’s PHP 7.3 RPM repository for Enterprise Linux 7 – x86_64 384

Looks like you are using my repository which provides most extensions

So, instead of trying to build it from sources, I recommend to simply use the available RPMs
```
yum install php-pecl-mongodb
```
Or if you use the Software Collections
```
yum install php73-pecl-mongodb
```
As explained by the Wizard

BTW, the installation issue seems related to ultra-centos-7.4-base (don’t even know what is this) as you have installed packages from 7.5
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